{"id":5692,"date":"2022-03-14T15:52:13","date_gmt":"2022-03-14T14:52:13","guid":{"rendered":"https:\/\/miracum.cms.rrze.uni-erlangen.de\/?page_id=5692"},"modified":"2024-09-23T09:09:05","modified_gmt":"2024-09-23T07:09:05","slug":"publikationen","status":"publish","type":"page","link":"https:\/\/www.miracum.org\/en\/weiterfuehrende-lektuere\/publikationen\/","title":{"rendered":"Publications"},"content":{"rendered":"<div class=\"rrze-elements accordion style_default\" id=\"accordion-0\">\n<div class=\"button-container-right\"><button class=\"expand-all standard-btn primary-btn xsmall-btn\" data-status=\"closed\">Expand All<\/button><\/div>\n<p><\/p>\n<div class=\"accordion-group fau\">\n<h2 class=\"accordion-heading\"><button class=\"accordion-toggle\" data-toggle=\"collapse\"  href=\"#collapse_0\" aria-expanded=\"true\" aria-controls=\"collapse_0\" id=\"collapse_button_0\"> 2024 <\/button><\/h2>\n<div id=\"collapse_0\" class=\"accordion-body  open\" aria-labelledby=\"collapse_button_0\">\n<div class=\"accordion-inner clearfix\">\n<p>Wabo GK, Moorthy P, Siegel F, Seuchter SA, Ganslandt T.<br \/>\n<a href=\"https:\/\/medinform.jmir.org\/2024\/1\/e57153\">Evaluating and Enhancing the Fitness-for-Purpose of Electronic Health Record Data: Qualitative Study on Current Practices and Pathway to an Automated Approach Within the Medical Informatics for Research and Care in University Medicine Consortium.<\/a><br \/>\nJMIR Med Inform. 2024; 12:e57153. DOI: 10.2196\/57153.<\/p>\n<p>Weckler BC, Pott H, Race A, Jugkaeo N, Karki K, Ringshandl S, Seidemann<br \/>\nC, Sch\u00f6ndorf I, Renz H, F\u00e4hndrich S, Jung AL, Bertrams W, Makoudjou A, Z\u00f6ller D, Finotto S, Schild S,<br \/>\nSeuchter SA, Rohde G, Trinkmann F, Greulich T, Vogelmeier CF, Schmeck B.<br \/>\n<a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S001236922404580X?via%3Dihub\">Eosinopenia as predictor of disease severity in patients with community-acquired pneumonia: an observational study.<\/a><br \/>\nCHEST. 2024. DOI: 10.1016\/j.chest.2024.05.041.<\/p>\n<p>Semler SC, Boeker M, Eils R, Krefting D, Loeffler M, Bussmann J, Wissing F, Prokosch HU.<br \/>\n<a href=\"https:\/\/link.springer.com\/article\/10.1007\/s00103-024-03887-5\">Die Medizininformatik-Initiative im \u00dcberblick\u00a0\u2013 Aufbau einer Gesundheitsforschungsdateninfrastruktur\u00a0in\u00a0Deutschland.<\/a><br \/>\nBundesgesundheitsbl. 2024. DOI: 10.1007\/s00103-024-03887-5.<\/p>\n<p>Krefting D, Bavendiek U, Fischer J, Marx G, Molinnus D, Panholzer T, Prokosch HU, Leb I, Weidner J, Sedlmayr M.<br \/>\n<a href=\"https:\/\/link.springer.com\/article\/10.1007\/s00103-024-03883-9#citeas\">Die digitalen Fortschrittshubs Gesundheit \u2013 Gemeinsame Datennutzung \u00fcber die Universit\u00e4tsmedizin hinaus.\u00a0<\/a><br \/>\nBundesgesundheitsbl. 2024. DOI: 10.1007\/s00103-024-03883-9.<\/p>\n<p>Waltemath D, Beyan O, Crameri K, Dedi\u00e9 A, Gierend K, Gr\u00f6ber P, Inau ET, Michaelis L, Reinecke I, Sedlmayr M, Thun S, Krefting D.<br \/>\n<a href=\"https:\/\/link.springer.com\/article\/10.1007\/s00103-024-03884-8#Abs1\">FAIRe Gesundheitsdaten im nationalen und internationalen Datenraum.<\/a><br \/>\nBundesgesundheitsbl<i>.<\/i> 2024. DOI: 10.1007\/s00103-024-03884-8.<\/p>\n<p>Ammon D, Kurscheidt M, Buckow K, Kirsten T, L\u00f6be M, Meineke F, Prasser F, Sa\u00df J, Sax U, St\u00e4ubert S, Thun S, Wettstein R, Wiedekopf JP, Wodke JAH, Boeker M, Ganslandt T<i>.<\/i><br \/>\n<a href=\"https:\/\/link.springer.com\/article\/10.1007\/s00103-024-03888-4\">Arbeitsgruppe Interoperabilit\u00e4t: Kerndatensatz und Informationssysteme f\u00fcr Integration und Austausch von Daten in der Medizininformatik-Initiative.<\/a><br \/>\nBundesgesundheitsbl. 2024. DOI: 10.1007\/s00103-024-03888-4.<\/p>\n<p>Kirsten T, Kleinert P, Gebhardt M, Drepper J, Andreeff AK, Prasser F, Kohlbacher O.<br \/>\n<a href=\"https:\/\/link.springer.com\/article\/10.1007\/s00103-024-03880-y\">Grundlagen f\u00fcr die wissenschaftliche Nutzung umfangreicher Versorgungsdaten in Deutschland \u2013 Ergebnisse der AG Data Sharing der Medizininformatik-Initiative.<\/a><br \/>\nBundesgesundheitsbl. 2024. DOI: 10.1007\/s00103-024-03880-y.<\/p>\n<p>Zenker S, Strech D, Jahns R, M\u00fcller G<u>,<\/u> Prasser F, Schickhardt C, Schmidt G, Semler SC, Winkler E, Drepper J.<br \/>\n<a href=\"https:\/\/link.springer.com\/article\/10.1007\/s00103-024-03878-6\">National standardisierter Broad Consent in der Praxis: erste Erfahrungen, aktuelle Entwicklungen und kritische Betrachtungen.<\/a><br \/>\nBundesgesundheitsbl. 2024. DOI: 10.1007\/s00103-024-03879-5<\/p>\n<p>Albashiti F, Thasler R, Wendt T, Bathelt F, Reinecke I, Schreiweis B.<br \/>\n<a href=\"https:\/\/link.springer.com\/article\/10.1007\/s00103-024-03879-5\">Die Datenintegrationszentren \u2013 Von der Konzeption in der Medizininformatik-Initiative zur lokalen Umsetzung in einem Netzwerk Universit\u00e4tsmedizin.<\/a><br \/>\nBundesgesundheitsbl. 2024. DOI: 10.1007\/s00103-024-03879-5.<\/p>\n<p>Gulden C, Macho P, Reinecke I, Strantz C, Prokosch HU, Blasini R.<br \/>\n<a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0010482524004955?via%3Dihub\">recruIT: A cloud-native clinical trial recruitment support system based on Health Level 7 Fast Healthcare Interoperability Resources (HL7 FHIR) and the Observational Medical Outcomes Partnership Common Data Model (OMOP CDM)<\/a>.<br \/>\nComputers in Biology and Medicine. 2024<em>;<\/em> in Press. DOI: https:\/\/doi.org\/10.1016\/j.compbiomed.2024.108411.<\/p>\n<p>Boeker M, Z\u00f6ller D, Blasini R, Macho P, Helfer S, Behrens M, Prokosch HU, Gulden C<em>.<\/em><br \/>\n<a href=\"https:\/\/trialsjournal.biomedcentral.com\/articles\/10.1186\/s13063-024-07918-z\">Effectiveness of IT-supported patient recruitment: study protocol for an interrupted time series study at ten German university hospitals.\u00a0<\/a><br \/>\nTrials. 2024; 25:125. DOI: 10.1186\/s13063-024-07918-z.<\/p>\n<p>Blasini R, Strantz C, Gulden C, Helfer S, Lidke J, Prokosch HU, Sohrabi K, Schneider H.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/38294862\/\">Evaluation of Eligibility Criteria Relevance for the Purpose of IT-Supported Trial Recruitment: Descriptive Quantitative Analysis &#8211; PubMed (nih.gov)<\/a><br \/>\nJMIR Form Res. 2024; 8:e49347. DOI: 10.2196\/49347<\/p>\n<p>Z\u00f6ller D, Haverkamp C, Makoudjou A, Sofack G, Kiefer S, Gebele D, Pfaffenlehner M, Boeker M, Binder H, Karki K, Seidemann C, Schmeck B, Greulich T, Renz H, Schild S, Seuchter SA, Tibyampansha D, Buhl R, Rohde G, Trudzinski FC, Bals R, Janciauskiene S, Stolz D, F\u00e4hndrich S.<br \/>\n<a href=\"https:\/\/respiratory-research.biomedcentral.com\/articles\/10.1186\/s12931-023-02607-y\">Alpha-1-antitrypsin-deficiency is associated with lower cardiovascular risk: an approach based on federated learning.<\/a><br \/>\nRespir Res 2024; 25:38. DOI: 10.1186\/s12931-023-02607-y.<\/p>\n<\/div>\n<\/div>\n<\/div>\n<p><div class=\"rrze-elements accordion style_default\" id=\"accordion-1\"><\/div>\n<p><\/p>\n<div class=\"accordion-group fau\">\n<h2 class=\"accordion-heading\"><button class=\"accordion-toggle\" data-toggle=\"collapse\"  href=\"#collapse_1\" aria-expanded=\"false\" aria-controls=\"collapse_1\" id=\"collapse_button_1\"> 2023 <\/button><\/h2>\n<div id=\"collapse_1\" class=\"accordion-body\" aria-labelledby=\"collapse_button_1\">\n<div class=\"accordion-inner clearfix\">\n<p>Schmid K, Sehring J, N\u00e9meth A, Harter PN, Weber KJ, Vengadeswaran A, Storf H, Seidemann C, Karki K, Fischer P, Dohmen H, Selignow C, von Deimling A, Grau S, Schr\u00f6der U, Plate KH, Stein M, Uhl E, Acker T, Amsel D.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/38012085\/\">DistSNE: Distributed computing and online visualization of DNA methylation-based central nervous system tumor classification<\/a>.<br \/>\nBrain Patho 2023; e13228. DOI: 10.1111\/bpa.13228. Epub ahead of print.<\/p>\n<p><span class=\"info__authors\">Henke E, Peng Y, Reinecke I, Zoch M, Sedlmayr M, Bathelt F.<a href=\"https:\/\/medinform.jmir.org\/2023\/1\/e47310\"> An Extract-Transform-Load Process Design for the Incremental Loading of German Real-World Data Based on FHIR and OMOP CDM: Algorithm Development and Validation<\/a>. JMIR Med Inform 2023; 11:e47310. DOI: 10.2196\/47310.<br \/>\n<\/span><\/p>\n<p><span class=\"info__authors\">Wolfien M, <\/span><span class=\"info__authors\">Ahmadi N, <\/span><span class=\"info__authors\">Fitzer K, <\/span><span class=\"info__authors\">Grummt S, <\/span><span class=\"info__authors\">Heine KL, <\/span><span class=\"info__authors\">Jung IC,\u00a0 <\/span><span class=\"info__authors\">Krefting DK,<\/span><span class=\"info__authors\"> K\u00fchn A,<\/span><span class=\"info__authors\"> Peng Y,<\/span><span class=\"info__authors\"> Reinecke I, <\/span><span class=\"info__authors\">Scheel J,<\/span><span class=\"info__authors\"> Schmidt T,<\/span><span class=\"info__authors\"> Schm\u00fccker P,<\/span><span class=\"info__authors\"> Sch\u00fcttler C,<\/span><span class=\"info__authors\"> Waltemath D,<\/span><span class=\"info__authors\"> Zoch M,<\/span><span class=\"info__authors\"> Sedlmayr M<\/span>. <a href=\"https:\/\/www.jmir.org\/2023\/1\/e45948\">Ten Topics to Get Started in Medical Informatics Research<\/a>. J Med Internet Res 2023; 25:e45948. DOI: 10.2196\/45948.<\/p>\n<p>Scheible R, Thomczyk F, Blum M, Rautenberg M, Prunotto A, Yazijy S, Boeker M.<br \/>\n<a class=\"external-link\" href=\"https:\/\/academic.oup.com\/jamiaopen\/article\/6\/3\/ooad068\/7242495\" rel=\"nofollow\">Integrating row level security in i2b2: segregation of medical records into data marts without data replication and synchronization<\/a>.<br \/>\nJAMIA Open 2023; 6:ooad068. DOI: 10.1093\/jamiaopen\/ooad068.<\/p>\n<p>Sehring J, Dohmen H, Selignow C, Schmid K, Grau S, Stein M, Uhl E, Mukhopadhyay A, N\u00e9meth A, Amsel D, Acker T.<br \/>\n<a href=\"https:\/\/www.mdpi.com\/2072-6694\/15\/21\/5190\">Leveraging Attention-Based Convolutional Neural Networks for Meningioma Classification in Computational Histopathology<\/a>.<br \/>\nCancers 2023; 15:5190. DOI: 10.3390\/cancers15215190.<\/p>\n<p>Metzger P, Hess ME, Blaumeiser A, Pauli T, Schipperges V, Mertes R, Christoph J, Unberath P, Reimer N, Scheible R, Illert AL, Busch H, Andrieux G, Boerries M.<br \/>\nMIRACUM-Pipe: An Adaptable Pipeline for Next-Generation Sequencing Analysis, Reporting, and Visualization for Clinical Decision Making<br \/>\nCancers 2023; 15:3456. DOI: 10.3390\/cancers15133456.<\/p>\n<p>Mang JM, Prokosch HU, Kapsner L.<br \/>\nReproducibility in 2023 \u2013 An End-to-End Template for Analysis and Manuscript Writing<br \/>\nStud Health Technol Inform 2023; 18;302:58-62. DOI: 10.3233\/SHTI230064.<\/p>\n<p>Peng Y, Henke E, Reinecke I, Zoch M, Sedlmayr M, Bathelt F.<br \/>\n<a class=\"external-link\" href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1386505622002398?via%3Dihub\" rel=\"nofollow\">An ETL-process design for data harmonization to participate in international research with German real-world data based on FHIR and OMOP CDM.<\/a><br \/>\nInt J Med Inform 2023; 169:104925. DOI: 10.1016\/j.ijmedinf.2022.104925.<\/p>\n<\/div>\n<\/div>\n<\/div>\n<p><\/p>\n<div class=\"accordion-group fau\">\n<h2 class=\"accordion-heading\"><button class=\"accordion-toggle\" data-toggle=\"collapse\"  href=\"#collapse_2\" aria-expanded=\"false\" aria-controls=\"collapse_2\" id=\"collapse_button_2\"> 2022 <\/button><\/h2>\n<div id=\"collapse_2\" class=\"accordion-body\" aria-labelledby=\"collapse_button_2\">\n<div class=\"accordion-inner clearfix\">\n<p>Vass A, Reinecke I, Boeker M, Prokosch HU, Gulden C.<br \/>\n<a class=\"external-link\" href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/35672985\/\" rel=\"nofollow\">Availability of Structured Data Elements in Electronic Health Records for Supporting Patient Recruitment in Clinical Trials.<\/a><br \/>\nStud Health Technol Inform 2022; 290:130-134. DOI: 10.3233\/SHTI220046. PMID: 35672985.<\/p>\n<p>Scheible R, Caliskan D, Fischer P, Thomczyk F, Zabka S, Schneider H, Boeker M, Schulz S, Prokosch HU, Gulden C.<br \/>\n<a class=\"external-link\" href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/35672965\/\" rel=\"nofollow\">AHD2FHIR: A Tool for Mapping of Natural Language Annotations to Fast Healthcare Interoperability Resources \u2013 A Technical Case Report.<\/a><br \/>\nStud Health Technol Inform 2022; 290:32-36. DOI: 10.3233\/SHTI220026. PMID: 35672965.<\/p>\n<p>Bialke M, Geidel L, Hampf C, Blumentritt A, Penndorf P, Schuldt R, Moser F, Lang S, Werner P, St\u00e4ubert S, Hund H, Albashiti F, G\u00fchrer J, Prokosch H, Bahls T, Hoffmann W.<br \/>\n<a class=\"external-link\" href=\"https:\/\/bmcmedinformdecismak.biomedcentral.com\/articles\/10.1186\/s12911-022-02081-4\" rel=\"nofollow\">A FHIR has been lit on gICS: facilitating the standardised exchange of informed consent in a large network of university medicine.<\/a><br \/>\nBMC Med Inform Decis Mak 2022; 22:335. DOI: https:\/\/doi.org\/10.1186\/s12911-022-02081-4.<\/p>\n<p>Ahmadi N, Peng Y, Wolfien M, Zoch M, Sedlmayr M.<br \/>\n<a href=\"https:\/\/confluence.imi.med.fau.de\/download\/attachments\/82480194\/image2021-11-23_10-55-15.png?version=1&amp;modificationDate=1637661316000&amp;api=v2\" data-linked-resource-id=\"185866861\" data-linked-resource-version=\"1\" data-linked-resource-type=\"attachment\" data-linked-resource-default-alias=\"image2021-11-23_10-55-15.png\" data-nice-type=\"Image\" data-linked-resource-content-type=\"image\/png\" data-linked-resource-container-id=\"82480194\" data-linked-resource-container-version=\"178\">OMOP CDM Can Facilitate Data-Driven Studies for Cancer Prediction: A Systematic Review<\/a>.<br \/>\nInt. J. Mol. Sci 2022; 23:11834. DOI: https:\/\/doi.org\/10.3390\/ijms231911834.<\/p>\n<p>Scheer J, Volkert A, Brich N, Weinert L, Santhanam N, Krone M, Ganslandt T, Boeker M, Nagel T.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/36279164\/\">Visualization Techniques of Time-Oriented Data for the Comparison of Single Patients With Multiple Patients or Cohorts: Scoping Review<\/a>.<br \/>\nJ Med Internet Res 2022; 24:e38041. DOI:\u00a010.2196\/38041.<\/p>\n<p>Schoenthaler M, Fichtner UA;\u00a0 Boeker M; Zoeller D, Binder B, Prokosch HU, Praus P, Walther T, Glienke M, Horki P. Gratzke C; Farin-Glattacker E.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/35986287\/\">A nationwide registry for recurrent urolithiasis in the upper urinary tract \u2013 The RECUR study protocol<\/a>.<br \/>\nBMC Health Serv Res 2022; 22:1060. DOI: <span class=\"citation-doi\">10.1186\/s12913-022-08375-7. <\/span><\/p>\n<p>Mang JM, Seuchter S, Gulden C, Schild S, Kraska D, Prokosch HU, Kapsner LA.<br \/>\n<a href=\"https:\/\/bmcmedinformdecismak.biomedcentral.com\/articles\/10.1186\/s12911-022-01961-z\">DQAgui: a graphical user interface for the MIRACUM data quality assessment tool.<\/a><br \/>\nBMC Med Inform Decis Mak 2022; 22:213. DOI: 10.1186\/s12911-022-01961-z.<\/p>\n<p>Roschka S, Leddig T, Bullerjahn M, Richter G, Liedtke W, Martin M and Hoffmann W.<br \/>\n<a href=\"https:\/\/bmcmedinformdecismak.biomedcentral.com\/articles\/10.1186\/s12911-022-01922-6\" rel=\"nofollow\">Secondary use of health care data and left-over biosamples within the \u2018Medical Informatics Initiative\u2019 (MII): a quasi-randomized controlled evaluation of patient perceptions and preferences regarding the consent process<\/a>.<br \/>\nBMC Med Inform Decis Mak 2022; 22:184. DOI: 10.1186\/s12911-022-01922-6.<\/p>\n<p>Sch\u00fcttler C, Jahns R, Prokosch HU, Wach S, Wullich B.<br \/>\n<a href=\"https:\/\/link.springer.com\/article\/10.1007\/s00120-022-01850-3\" rel=\"nofollow\">Biobanken, translationale Forschung und Medizininformatik<\/a>.<br \/>\nUrologie 2022; DOI: 10.1007\/s00120-022-01850-3.<\/p>\n<p>Zenker S, Strech D, Ihrig K, Jahns R, M\u00fcller G, Schickhardt C, Schmidt G, Speer R, Winkler E, Graf von Kielmansegg S, Drepper J.<br \/>\n<a href=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S1532046422001125?dgcid=raven_sd_aip_email\">Data protection-compliant broad consent for secondary use of health care data and human biosamples for (bio)medical research: towards a new German national standard<\/a><br \/>\nJournal of Biomedical Informatics Available online 25 May 2022, 104096<\/p>\n<div class=\"citation-text\">\n<p>Reinecke I, Kallfelz M, Sedlmayr M, Siebel J, Bathelt F.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/35612106\/\">Evaluation and Challenges of Medical Procedure Data Harmonization to SNOMED-CT for Observational Research.<\/a><br \/>\nStud Health Technol Inform 2022; 294:405-406. DOI: 10.3233\/SHTI220484.<\/p>\n<p>Schulz S, Boeker M, Prunotto A.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/35612259\/\">Validation of Multiple Path Translation for SNOMED CT Localisation.<\/a><br \/>\nStud Health Technol Inform 2022; 294:961-962. DOI: 10.3233\/SHTI220641.<\/p>\n<p>Bathelt F, Reinecke I, Peng Y, Henke E, Weidner J, Bartos M, G\u00f6tt R, Waltemath D, Engelmann K, Schwarz PEH, Sedlmayr M.<br \/>\n<a href=\"https:\/\/www.mdpi.com\/2072-6643\/14\/10\/2016\/htm\">Opportunities of Digital Infrastructures for Disease Management\u2014Exemplified on COVID-19-Related Change in Diagnosis Counts for Diabetes-Related Eye Diseases<\/a><br \/>\nNutrients 2022; 14,2016. DOI: 10.3390\/nu14102016.<\/p>\n<p>Mari\u00f1o J, Kasbohm E, Struckmann S, Kapsner LA, Schmidt CO.<br \/>\n<a class=\"external-link\" href=\"https:\/\/doi.org\/10.3390\/app12094238\" rel=\"nofollow\">R Packages for Data Quality Assessments and Data Monitoring: A Software Scoping Review with Recommendations for Future Developments<\/a><br \/>\nApplied Scieneces 2022; 26. DOI: 10.3390\/app12094238.<\/p>\n<p>Fitzer K, H\u00e4uslschmid R, Blasini R, Altun FB, Hampf C, Freiesleben S, Macho P, Prokosch H, Gulden C.<br \/>\n<a href=\"https:\/\/medinform.jmir.org\/2022\/4\/e28696\">Patient Recruitment System for Clinical Trials: A Mixed-Methods Study about Requirements at 10 University Hospitals<\/a><br \/>\nJMIR Med Inf 2022. 10:e28696. DOI: 10.2196\/28696.<\/p>\n<p>Unberath P, Mahlmeister L, Reimer N, Busch H, Boerries M, Christoph J.<br \/>\n<a class=\"external-link\" href=\"https:\/\/www.thieme-connect.com\/products\/ejournals\/html\/10.1055\/s-0042-1743560\" rel=\"nofollow\">Searching of Clinical Trials Made Easier in cBioPortal Using Patients&#8217; Genetic and Clinical Profiles<\/a>.<br \/>\nAppl Clin Inform 2022. 13:363-369. DOI: 10.1055\/s-0042-1743560.<\/p>\n<p>Medenwald D, Brunner T, Christiansen H, Kisser U, Mansoorian S, Vordermark D, Prokosch HU, Seuchter SA, Kapsner LA on behalf of our MII research group.<br \/>\n<a class=\"external-link\" href=\"https:\/\/link.springer.com\/article\/10.1007\/s00066-021-01883-1\" rel=\"nofollow\">Shift of radiotherapy use during the first wave of the COVID-19 pandemic? An analysis of German inpatient data<\/a><br \/>\nStrahlenther Onkol 2022. DOI: 10.1007\/s00066-021-01883-1.<\/p>\n<p>Spohr C, Poggio T, Andrieux G, Sch\u00f6nberger K, Cabezas-Wallscheid N, Boerries M, Halbach S, Illert AL, Brummer T.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34903841\/\">Gab2 deficiency prevents Flt3-ITD driven acute myeloid leukemia in vivo<\/a><br \/>\nLeukemia 2022; 36:970-982. DOI: 10.1038\/s41375-021-01490-0.<\/p>\n<p>Frey P, Devisme A, Rose K, Schrempp M, Freihen V, Andrieux G, Boerries M, Hecht A.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34857888\/\">SMAD4 mutations do not preclude epithelial-mesenchymal transition in colorectal cancer<\/a><br \/>\nOncogene 2022; 41:824-837. DOI: 10.1038\/s41388-021-02128-2.<\/p>\n<p>H\u00e4rzschel A, Li L, Krenn PW, Szenes-Nagy E, Andrieux G, Bayer E, Pfeifer D, Polcik L, Denk U, H\u00f6pner JP, Karabatak E, Danner DJ, Tangermann S, Kenner L, Jumaa H, Greil R, B\u00f6rries M, Ruppert R, Maity PC, Hartmann TN.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34888947\/\">Kindlin-3 maintains marginal zone B cells but confines follicular B cell activation and differentiation<\/a><br \/>\nJ Leukoc Biol 2022; 111:745-758. DOI: 10.1002\/JLB.1HI0621-313R.<\/p>\n<p>Scheible R, Strecker P, Yazijy S, Talpa R, Puhl A, Boeker M.<br \/>\n<a class=\"external-link\" href=\"https:\/\/ebooks.iospress.nl\/doi\/10.3233\/SHTI210939\" rel=\"nofollow\">A Multilingual Browser Platform for Medical Subject Headings<\/a><br \/>\nStud Health Technol Inform 2022; 289:384-387. DOI: 10.3233\/SHTI210939.<\/p>\n<p>Strecker P, Boeker M, Buechner S, Scheible R.<br \/>\n<a class=\"external-link\" href=\"https:\/\/ebooks.iospress.nl\/doi\/10.3233\/SHTI220653\" rel=\"nofollow\">Usability Evaluation of a Modern Multilingual MeSH Browser<\/a><br \/>\nStud Health Technol Inform 2022; 295:37-40. DOI: 10.3233\/SHTI220653.<\/p>\n<\/div>\n<\/div>\n<\/div>\n<p><\/p>\n<div class=\"accordion-group fau\">\n<h2 class=\"accordion-heading\"><button class=\"accordion-toggle\" data-toggle=\"collapse\"  href=\"#collapse_3\" aria-expanded=\"false\" aria-controls=\"collapse_3\" id=\"collapse_button_3\"> 2021 <\/button><\/h2>\n<div id=\"collapse_3\" class=\"accordion-body\" aria-labelledby=\"collapse_button_3\">\n<div class=\"accordion-inner clearfix\">\n<p>Devane J, Ott E, Olinger EG, Epting D, Decker E, Friedrich A, Bachmann N, Renschler G, Eisenberger T, Briem-Richter A, Grabhorn EF, Powell L, Wilson IJ, Rice SJ, Miles CG, Wood K; Genomics England Research Consortium; Trivedi P, Hirschfield G, Pietrobattista A, Wohler E, Mezina A, Sobreira N, Agolini E, Maggiore G, Dahmer-Heath M, Yilmaz A, Boerries M, Metzger P, Schell C, Gr\u00fcnewald I, Konrad M, K\u00f6nig J, Schlevogt B, Sayer JA, Bergmann C.<br \/>\n<a class=\"external-link\" href=\"https:\/\/ebooks.iospress.nl\/doi\/10.3233\/SHTI220653\" rel=\"nofollow\">Progressive liver, kidney, and heart degeneration in children and adults affected by TULP3 mutations &#8211; PMC (nih.gov)<\/a><br \/>\nAm J Hum Genet 2022; 109: 928\u2013943. DOI: 10.1016\/j.ajhg.2022.03.015.<\/p>\n<p>Ustjanzew A, Desuki A, Ritzel C, Dolezilek AC, Wagner DC, Christoph J, Unberath P, Kindler T, Faber J, Marini F, Panholzer T, Paret C.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34930224\/\"><span dir=\"ltr\" role=\"presentation\">cbpManager: a web application to streamline the integration of clinical and genomic data in cBioPortal to support the Molecular Tumor Board <\/span><\/a><br \/>\nBMC Med Inform Dec Mak 2021, 21:358. DOI: 1<span dir=\"ltr\" role=\"presentation\">10.1186\/s12911-021-01719-z.<\/span><\/p>\n<p>Reimer N, Unberath P, Busch H, B\u00f6rries M, Metzger P, Ustjanzew A, Renner C, Prokosch HU, Christoph J.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34795098\/\"><span dir=\"ltr\" role=\"presentation\">Challenges and Experiences Extending the <\/span><span dir=\"ltr\" role=\"presentation\">cBioPortal for Cancer Genomics to a <\/span><span dir=\"ltr\" role=\"presentation\">Molecular Tumor Board Platform<\/span><\/a><br \/>\nStud Health Technol Inform 2021; 287: 139-143. DOI: 1<span dir=\"ltr\" role=\"presentation\">0.3233\/SHTI210833.<\/span><\/p>\n<p>Walther T, Farin E, Boeker M, Prokosch HU, Binder B, Praus F, Ploner N, Fichtner UA, Horki P, Haeuslschmid R, Seuchter S, Gratzke C, Schoenthaler M.<br \/>\n<a class=\"external-link\" href=\"https:\/\/www.thieme-connect.com\/products\/ejournals\/html\/10.1055\/a-1651-0311#info\" rel=\"nofollow\">RECUR \u2013 Aufbau eines automatisierten digitalen Registers f\u00fcr Patient*innen mit rezidivierenden Steinen des oberen Harntraktes<\/a><br \/>\nGesundheitswesen 2021; 83: S27-S32. DOI: 10.1055\/a-1651-0311.<\/p>\n<p>Reinecke I, Zoch M, Reich C, Sedlmayr M, Bathelt F.<br \/>\n<span class=\"docsum-authors full-authors\"><a class=\"external-link\" href=\"https:\/\/ebooks.iospress.nl\/volumearticle\/57507\" rel=\"nofollow\">The usage of OHDSI OMOP \u2013 A Scoping Review<\/a>.<\/span><br \/>\nStud Health Technol Inform 2021; 283:95-103. DOI<span dir=\"ltr\" role=\"presentation\">: 10.3233\/SHTI210546.<\/span><\/p>\n<p>Kapsner LA, Mang JM, Mate S, Seuchter SA, Vengadeswaran A, Bathelt F, Deppenwiese N, Kadioglu D, Kraska D, Prokosch HU.<br \/>\n<span class=\"docsum-authors full-authors\"><a href=\"https:\/\/doi.org\/10.1055\/s-0041-1733847\">Linking a Consortium-Wide Data Quality Assessment Tool with the MIRACUM Metadata Repository<\/a><\/span><br \/>\nAppl Clin Inform 2021; 12:826-835. DOI: 10.1055\/s-0041-1733847.<\/p>\n<p><span class=\"docsum-authors full-authors\">Sch\u00fcttler C, Prokosch HU, Sedlmayr M, Sedlmayr B.<br \/>\n<a href=\"https:\/\/medinform.jmir.org\/2021\/7\/e25531\/\">Evaluation of Three Feasibility Tools for Identifying Patient Data and Biospecimen Availability: Comparative Usability Study<\/a><br \/>\nJMIR Med Inform 2021;9(7):e25531, DOI: 10.2196\/25531.<\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Reimer N, Unberath P, Busch H, Ingenerf J.<\/span><br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34042754\/\">FhirSpark \u2013 Implementing a Mediation Layer to Bring FHIR to the cBioPortal for Cancer Genomics<\/a><br \/>\nStud Health Technol Inform 2021; 281:303-307. DOI: <label><\/label>10.3233\/SHTI210169<\/p>\n<p><span class=\"docsum-authors full-authors\">Zoch M, Gierschner C, Peng Y, Gruhl M, Leutner LA, Sedlmayr M, Bathelt F.<\/span><br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34042721\/\">Adaption of the OMOP CDM for Rare Diseases<\/a><br \/>\nStud Health Technol Inform 2021; 281:138-142. DOI: 10.3233\/SHTI210136.<\/p>\n<p>Sass J, Zabka S, Essenwanger A, Schepers J, Boeker M, Thun S.<br \/>\n<a class=\"external-link\" href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34042899\/\" rel=\"nofollow\">Fast Healthcare Interoperability Resources (FHIR\u00ae) Representation of Medication Data Derived from German Procedure Classification Codes (OPS) Using Identification of Medicinal Products (IDMP) Compliant Terminology<\/a><br \/>\nStud Health Technol Inform 2021; 278:231-236. DOI: 10.3233\/SHTI210074.<\/p>\n<p><span class=\"docsum-authors full-authors\">Mate S, Seuchter SA, Ehrenberg K, Deppenwiese N, Zierk J, Prokosch HU, Kraska D, Kapsner LA.<\/span><br \/>\n<a href=\"https:\/\/ebooks.iospress.nl\/doi\/10.3233\/SHTI210072\">A Multi-User Terminology Mapping Toolbox<\/a><br \/>\n<span class=\"docsum-journal-citation full-journal-citation\">Stud Health Technol Inform 2021; 278:217-223. DOI: 10.3233\/SHTI210072.<\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Schaaf J, Sedlmayr M, Prokosch HU, Tegtbauer N, Kadioglu D, Schaefer J, Boeker M, Storf H.<br \/>\n<a href=\"https:\/\/ebooks.iospress.nl\/doi\/10.3233\/SHTI210050\">Visualization of Similar Patients in a Clinical Decision Support System for Rare Diseases \u2013 A Focus Group Study<\/a><br \/>\n<span class=\"docsum-journal-citation full-journal-citation\">Stud Health Technol Inform 2021; 278:49-57. DOI: 10.3233\/SHTI210050.<\/span><\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Caliskan D, Zierk J, Kraska D, Schulz S, Daumke P, Prokosch HU, Kapsner LA.<br \/>\n<a href=\"https:\/\/ebooks.iospress.nl\/doi\/10.3233\/SHTI210073\">First Steps to Evaluate an NLP Tool\u2019s Medication Extraction Accuracy from Discharge Letters<\/a><br \/>\n<span class=\"docsum-journal-citation full-journal-citation\">Stud Health Technol Inform 2021; 278:224-230. DOI: 10.3233\/SHTI210073.<\/span><\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Kapsner LA, Zavgorodnij MG, Majorova SP, Hotz\u2010Wagenblatt A, Kolychev OV, Lebedev IN, Hoheisel JD, Hartmann A, Bauer A, Mate S, Prokosch H, Haller F, and Moskalev EA.<br \/>\n<a class=\"external-link\" href=\"https:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/ijc.33681\" rel=\"nofollow\">BiasCorrector: fast and accurate correction of all types of experimental biases in quantitative DNA methylation data derived by different technologies<\/a><br \/>\nInt. J. Cancer 2021; ijc.33681. DOI: 10.1002\/ijc.33681.<\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Maier C,\u00a0 Kapsner LA, Mate S, Prokosch HU, Kraus S.<br \/>\n<a class=\"external-link\" href=\"https:\/\/www.thieme-connect.de\/products\/ejournals\/abstract\/10.1055\/s-0040-1721481\" rel=\"nofollow\">Patient Cohort Identification on Time Series Data Using the OMOP Common Data Model<\/a><br \/>\nAppl Clin Inform 2021; 12: 057-064. DOI: 10.1055\/s-0040-1721481.<\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Lenz S, Hess M, Binder H.<br \/>\n<a class=\"external-link\" href=\"https:\/\/bmcmedresmethodol.biomedcentral.com\/articles\/10.1186\/s12874-021-01237-6\" rel=\"nofollow\">Deep generative models in DataSHIELD<\/a><br \/>\nBMC Med Res Methodol 2021; 21: 64. DOI: 10.1186\/s12874-021-01237-6.<\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Gruendner J, Gulden C, Kampf MO, Mate S, Prokosch HU, Zierck J.<br \/>\n<a href=\"https:\/\/medinform.jmir.org\/2021\/4\/e25645\">A Framework for Criteria-Based Selection and Processing of Fast Healthcare Interoperability Resources (FHIR) Data for Statistical Analysis: Design and Implementation Study<\/a><br \/>\nJMIR Med Inform 2021; 9: e25645. DOI: 10.2196\/25645.<\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Sch\u00fcttler J, Mang JM, Kapsner LA, Seuchter SA, Binder H, Z\u00f6ller D, Kohlbacher O, Boeker M, Zacharowski K, Rohde G, Balig J, Kampf MO, R\u00f6hrig R, Prokosch HU<br \/>\n<a href=\"https:\/\/www.ai-online.info\/archiv\/2021\/06-2021\/letalitaet-von-patienten-mit-covid-19-untersuchungen-zu-ursachen-und-dynamik-an-deutschen-univer-sitaetsklinika.html\">Letalit\u00e4t von Patienten mit COVID-19: Untersuchungen zu Ursachen und Dynamik an deutschen Universit\u00e4tsklinika<\/a><br \/>\nAn\u00e4sth Intensivmed 2021; 62: <span dir=\"ltr\">244\u2013257. DOI: 10.19224\/ai2021.244<\/span>.<\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Hampf C, Bialke M, Geidel L, Vass A, Bahls T, Blasini R, Blumentritt A, Boeker M, Bruns C, Jandrig B, F\u00fcnfgeld M, Heinrich P, Leddig T, Michel-Backofen A, Pirkl A, Rautenberg M, Simons F, Stahl D, Prokosch HU, Hoffmann W.<br \/>\n<a class=\"external-link\" href=\"https:\/\/transmedcomms.biomedcentral.com\/articles\/10.1186\/s41231-021-00086-1\" rel=\"nofollow\">A survey on the current status and future perspective of informed consent management in the MIRACUM consortium of the German Medical Informatics Initiative<\/a><br \/>\nBMC transl med commun 2021; 6:7. DOI: 10.1186\/s41231-021-00086-1.<\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Schaaf J, Sedlmayr M, Sedlmayr B, Prokosch HU, Storf H.<br \/>\n<a href=\"https:\/\/bmcmedinformdecismak.biomedcentral.com\/articles\/10.1186\/s12911-021-01435-8\">Evaluation of a clinical decision support system for rare diseases: a qualitative study<\/a><br \/>\nBMC Med Inform Decis Mak 2021; 21:6. DOI: 10.1186\/s12911-021-01435-8.<\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Klann JG et al.<br \/>\n<a href=\"https:\/\/academic.oup.com\/jamia\/advance-article\/doi\/10.1093\/jamia\/ocab018\/6132348\">Validation of an Internationally Derived Patient Severity Phenotype to Support COVID-19 Analytics from Electronic Health Record Data<\/a><br \/>\nJ Am Med Inform Assoc 2021; <span class=\"cit\">ocab018.\u00a0<\/span><span class=\"citation-doi\"> DOI: 10.1093\/jamia\/ocab018.<\/span><\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Kapsner LA, Kampf MO, Seuchter SA, Gruendner J, Gulden C, Mate S, Mang JM, Sch\u00fcttler C, Deppenwiese N, Krause L, Z\u00f6ller D, Balig J, Fuchs T, Fischer P, Haverkamp C, Holderried M, Mayer G, Stenzhorn H, Stolnicu A, Storck M, Storf H, Zohner J, Kohlbacher O, Strzelczyk A, Sch\u00fcttler J, Acker T, Boeker M, Kaisers UX, Kestler HA, Prokosch HU on behalf of our MII-Research Group.<br \/>\n<a href=\"https:\/\/www.frontiersin.org\/articles\/10.3389\/fpubh.2020.594117\/full?&amp;utm_source=Email_to_authors_&amp;utm_medium=Email&amp;utm_content=T1_11.5e1_author&amp;utm_campaign=Email_publication&amp;field=&amp;journalName=Frontiers_in_Public_Health&amp;id=594117\">Reduced Rate of Inpatient Hospital Admissions in 18 German University Hospitals During the COVID-19 Lockdown<\/a><br \/>\nFront. Public Health 2021; 8:594117. DOI: 10.3389\/fpubh.2020.594117.<\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Melzer G, Maiwald T, Prokosch HU, Ganslandt T.<br \/>\n<a href=\"https:\/\/www.thieme-connect.com\/products\/ejournals\/abstract\/10.1055\/s-0040-1721010\">Leveraging Real-World Data for the Selection of Relevant Eligibility Criteria for the Implementation of Electronic Recruitment Support in Clinical Trials<\/a><br \/>\nAppl Clin Inform 2021; 12:017-026. DOI: 10.1055\/s-0040-1721010.<\/span><\/p>\n<p><span class=\"docsum-authors full-authors\">Gulden C, Blasini R, Nassirian A, Stein A, Altun F, Kirchner M, Prokosch HU, Boeker M.<br \/>\n<a class=\"external-link\" href=\"https:\/\/medinform.jmir.org\/2021\/1\/e20470\" rel=\"nofollow\">Prototypical Clinical Trial Registry Based on Fast Healthcare Interoperability Resources (FHIR): Design and Implementation Study<\/a><br \/>\nJMIR Med Inform 2021; 9:e20470. DOI: 10.2196\/20470.<\/span><\/p>\n<p>Gr\u00fcnwald BT, Devisme A, Andrieux G, Vyas F, Aliar K, McCloskey CW, Macklin A, Jang GH, Denroche R, Romero JM, Bavi P, Bronsert P, Notta F, O&#8217;Kane G, Wilson J, Knox J, Tamblyn L, Udaskin M, Radulovich N, Fischer SE,\u00a0Boerries M, Gallinger S, Kislinger T, Khokha R.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34644529\/\">Spatially confined sub-tumor microenvironments in pancreatic cancer<\/a><br \/>\nCell 2021; 184:5577-5592.e18. DOI: 10.1016\/j.cell.2021.09.022.<\/p>\n<p>Sicklinger F, Meyer IS, Li X, Radtke D, Dicks S, Kornadt MP, Mertens C, Meier JK, Lavine KJ, Zhang Y, Kuhn TC, Terzer T, Patel J, Boerries M, Schramm G, Frey N, Katus HA, Voehringer D, Leuschner F.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34196299\/\">Basophils balance healing after myocardial infarction via IL-4\/IL-13<\/a><br \/>\nJ Clin Invest 2021; 131:e136778. DOI: 10.1172\/JCI136778.<\/p>\n<p>Haring E, Andrieux G, Uhl FM, Krausz M, Proietti M, Sauer B, Esser PR, Martin SF, Pfeifer D, Schmitt-Graeff A, Duyster J, K\u00f6hler N, Grimbacher B, Boerries M, Aumann K, Zeiser R, Apostolova P.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34407601\/\">Therapeutic targeting of endoplasmic reticulum stress in acute graft-versus-host disease <\/a><br \/>\nHaematologica 2021;\u00a0 DOI: 10.3324\/haematol.2021.278387. Online ahead of print.<\/p>\n<p>Kl\u00e4sener K, Jellusova J, Andrieux G, Salzer U, B\u00f6hler C, Steiner SN, Albinus JB, Cavallari M, S\u00fc\u00df B, Voll RE, Boerries M, Wollscheid B, Reth M.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/33563755\/\">CD20 as a gatekeeper of the resting state of human B cells<\/a><br \/>\nProc Natl Acad Sci U S A 2021; 118:e2021342118. DOI: 10.1073\/pnas.2021342118.<\/p>\n<p>Corrales E, Levit-Zerdoun E, Metzger P, Kowar S, Ku M, Brummer T, Boerries M.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34930313\/\">Dynamic transcriptome analysis reveals signatures of paradoxical effect of vemurafenib on human dermal fibroblasts<\/a><br \/>\nCell Commun Signal 2021; 19:123. DOI: 10.1186\/s12964-021-00801-3.<\/p>\n<p>Osswald L, Hamarsheh S, Uhl FM, Andrieux G, Klein C, Dierks C, Duquesne S, Braun LM, Schmitt-Graeff A, Duyster J, Boerries M, Brummer T, Zeiser R.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34088868\/\">Oncogenic KrasG12D Activation in the Nonhematopoietic Bone Marrow Microenvironment Causes Myelodysplastic Syndrome in Mice<\/a><br \/>\nMol Cancer Res 2021; 19:1596-1608. DOI: 10.1158\/1541-7786.MCR-20-0275.<\/p>\n<p>Hoefflin R, Harlander S, Abhari BA, Peighambari A, Adlesic M, Seidel P, Zodel K, Haug S, G\u00f6cmen B, Li Y, Lahrmann B, Grabe N, Heide D, Boerries M, K\u00f6ttgen A, Heikenwalder M, Frew IJ.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/34638286\/\">Therapeutic Effects of Inhibition of Sphingosine-1-Phosphate Signaling in HIF-2\u03b1 Inhibitor-Resistant Clear Cell Renal Cell Carcinoma<\/a><br \/>\nCancers (Basel) 2021; 13:4801. DOI: 10.3390\/cancers13194801.<\/p>\n<p>Bauer C, Quante M, Breunis WB, Regina C, Schneider M, Andrieux G, Gorka O, Gro\u00df O, Boerries M, Kammerer B, Hettmer S.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/33499165\/\">Lack of Electron Acceptors Contributes to Redox Stress and Growth Arrest in Asparagine-Starved Sarcoma Cells<\/a><br \/>\nCancers (Basel) 2021; 13:412. DOI: 10.3390\/cancers13030412.<\/p>\n<p>Haring E, Uhl FM, Andrieux G, Proietti M, Bulashevska A, Sauer B, Braun LM, de Vega Gomez E, Esser PR, Martin SF, Pfeifer D, Follo M, Schmitt-Graeff A, Buescher J, Duyster J, Grimbacher B, Boerries M, Pearce EL, Zeiser R, Apostolova P.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/32675222\/\">Bile acids regulate intestinal antigen presentation and reduce graft-versus-host disease without impairing the graft-versus-leukemia effect<\/a><br \/>\nHaematologica 2021; 106:2131-2146. DOI: 10.3324\/haematol.2019.242990.<\/p>\n<p>Hoefflin R, Lazarou A, Hess ME, Reiser M, Wehrle J, Metzger P, Frey AV, Becker H, Aumann K, Berner K, Boeker M, Buettner N, Dierks C, Duque-Afonso J, Eisenblaetter M, Erbes T, Fritsch R, Ge IX, Gei\u00dfler AL, Grabbert M, Heeg S, Heiland DH, Hettmer S, Kayser G, Keller A, Kleiber A, Kutilina A, Mehmed L, Meiss F, Poxleitner P, Rawluk J, Ruf J, Sch\u00e4fer H, Scherer F, Shoumariyeh K, Tzschach A, Peters C, Brummer T, Werner M, Duyster J, Lassmann S, Miething C, Boerries M, Illert AL, von Bubnoff N.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/33800365\/\">Transitioning the Molecular Tumor Board from Proof of Concept to Clinical Routine: A German Single-Center Analysis<\/a><br \/>\nCancers (Basel) 2021; 13:1151. DOI: 10.3390\/cancers13051151.<\/p>\n<p>Kind F, Fassbender TF, Andrieux G, Boerries M, Meyer PT, Ruf J.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/35008315\/\">Early PSA Change after [177Lu]PSMA-617 Radioligand Therapy as a Predicator of Biochemical Response and Overall Survival<\/a><br \/>\nCancers (Basel) 2021; 14:149. DOI: 10.3390\/cancers14010149.<\/p>\n<p>Hussung S, Akhoundova D, Hipp J, Follo M, Klar RFU, Philipp U, Scherer F, von Bubnoff N, Duyster J, Boerries M, Wittel U, Fritsch RM.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/33430810\/\">Longitudinal analysis of cell-free mutated KRAS and CA 19-9 predicts survival following curative resection of pancreatic cancer<\/a><br \/>\n<span class=\"cit\">BMC Cancer 2021; 21:49.<\/span> DOI<span class=\"citation-doi\">: 10.1186\/s12885-020-07736-x. <\/span><\/p>\n<\/div>\n<\/div>\n<\/div>\n<p><\/p>\n<div class=\"accordion-group fau\">\n<h2 class=\"accordion-heading\"><button class=\"accordion-toggle\" data-toggle=\"collapse\"  href=\"#collapse_4\" aria-expanded=\"false\" aria-controls=\"collapse_4\" id=\"collapse_button_4\"> 2020 <\/button><\/h2>\n<div id=\"collapse_4\" class=\"accordion-body\" aria-labelledby=\"collapse_button_4\">\n<div class=\"accordion-inner clearfix\">\n<p>Pugliese P, Knell C, Christoph J.<br \/>\n<a href=\"https:\/\/www.thieme-connect.de\/products\/ejournals\/abstract\/10.1055\/s-0040-1712968\">Exchange of Clinical and Omics Data According to FAIR Principles: A Review of Open Source Solutions<\/a><br \/>\nMethods Inf Med 2020; 59:e13-e20. DOI: 10.1055\/s-0040-1712968.<\/p>\n<p>Gruendner J, Wolf N, T\u00f6gel L, Haller F, Prokosch HU, Christoph J.<br \/>\n<a href=\"https:\/\/www.jmir.org\/2020\/10\/e19879\">Integrating Genomics and Clinical Data for Statistical Analysis by Using GEnome MINIng (GEMINI) and Fast Healthcare Interoperability Resources (FHIR): System Design and Implementation<\/a><br \/>\nJMIR 2020; 22:e19879. DOI: 10.2196\/19879.<\/p>\n<p>Schaaf J, Prokosch HU,\u00a0 Boeker M, Schaefer J, Vasseur J, Storf H, Sedlmayr M.<br \/>\n<a href=\"https:\/\/bmcmedinformdecismak.biomedcentral.com\/articles\/10.1186\/s12911-020-01254-3\">Interviews with experts in rare diseases for the development of clinical decision support system software \u2013 a qualitative study<\/a><br \/>\nBMC Med Inform Decis Mak 2020; 20<strong>, <\/strong>230. DOI: 10.1186\/s12911-020-01254-3.<\/p>\n<p>Jaravine V, Balmford J, Metzger P, Boerries M, Binder H, Boeker M.<br \/>\n<a href=\"https:\/\/www.mdpi.com\/2073-4425\/11\/9\/1076\">Annotation of Human Exome Gene Variants with Consensus Pathogenicity<\/a><br \/>\nGenes 2020; 11 (9), 1076. DOI: 10.3390\/genes11091076.<\/p>\n<p>Brat GA, Weber GM, Gehlenborg N et al.<br \/>\n<a href=\"https:\/\/www.nature.com\/articles\/s41746-020-00308-0\">International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium<\/a><br \/>\nnpj Digi. Med 2020; 3<strong>, <\/strong>109. DOI: <span class=\"c-bibliographic-information__value\">10.1038\/s41746-020-00308-0<\/span>.<\/p>\n<p>Rau H, Geidel L, Bialke M, Blumentritt A, Langanke M, Liedtke W, Pasewald S, Stahl D, Bahls T, Maier C, Prokosch HU, Hoffmann W.<br \/>\n<a href=\"https:\/\/translational-medicine.biomedcentral.com\/articles\/10.1186\/s12967-020-02457-y\">The generic Informed Consent Service gICS<sup>\u00ae<\/sup>: implementation and benefits of a modular consent software tool to master the challenge of electronic consent management in research<\/a><br \/>\nJ Transl Med 2020; 18, 287. DOI: 10.1186\/s12967-020-02457-y.<\/p>\n<p>Fuchs M, Kreutzer FP, Kapsner L.A, Mitzka S, Just A, Perbellini F, Terracciano CM, Xiao K, Geffers R, Bogdan C, Prokosch, HU, Fiedler J, Thum T, Kunz M.<br \/>\n<a class=\"external-link\" href=\"https:\/\/www.mdpi.com\/1422-0067\/21\/13\/4727\" rel=\"nofollow\">Integrative Bioinformatic Analyses of Global Transcriptome Data Decipher Novel Molecular Insights into Cardiac Anti-Fibrotic Therapies<\/a><br \/>\nInt J Mol Sci 2020; 21, 4727. DOI: 10.3390\/ijms21134727.<\/p>\n<p>Schaaf J, Sedlmayr M, Prokosch HU, Ganslandt T, Schade-Brittinger C, von Wagner M, Kadioglu D, Schubert K, Lee-Kirsch MA, K. Kraemer BK, Winner B, Mueller T,\u00a0 Schaefer JR, Wagner TOF, Bruckner-Tuderman L, Tuescher O, Boeker M, Storf H.<br \/>\n<a class=\"external-link\" href=\"http:\/\/ebooks.iospress.nl\/volumearticle\/54508\" rel=\"nofollow\">The Status Quo of Rare Diseases Centres for the Development of a Clinical Decision Support System \u2013 A Cross-Sectional Study<\/a><br \/>\n<span class=\"cit\">Stud Health Technol Inform 2020; 271:176-183. DOI<\/span><span class=\"citation-doi\">: 10.3233\/SHTI200094.<\/span><\/p>\n<p>Ploner N, Prokosch HU.<br \/>\n<a class=\"external-link\" href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/32570530\/\" rel=\"nofollow\">Integrating a Secure and Generic Mobile App for Patient Reported Outcome Acquisition into an EHR Infrastructure Based on FHIR Resources<\/a><br \/>\nStud Health Technol Inform 2020; 270:991-995. DOI: <span class=\"identifier doi\">10.3233\/SHTI200310.<\/span><\/p>\n<p>Gruhl M, Reinecke I, Sedlmayr M.<br \/>\n<a class=\"external-link\" href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/32570675\/\" rel=\"nofollow\">Specification and Distribution of Vocabularies Among Consortial Partners<\/a><br \/>\nS<span class=\"period\">tud Health Technol Inform 2020<\/span><span class=\"cit\">; 270:1393-1394. <\/span><span class=\"identifier doi\"><span class=\"id-label\">DOI:\u00a0<\/span>10.3233\/SHTI200458.<\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\"><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\"><span class=\"inline-comment-marker active\" data-ref=\"787cb792-c265-4306-ba1a-a3bd5ef96a44\">Reinecke I, Gulden C, K\u00fcmmel M, Nassirian A, Blasini R, Sedlmayr M.<\/span><\/span><\/span><\/span><br \/>\n<a class=\"external-link\" href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/32570366\/\" rel=\"nofollow\">Design for a Modular Clinical Trial Recruitment Support System Based on FHIR and OMOP<\/a><br \/>\nS<span class=\"period\">tud Health Technol Inform 2020<\/span><span class=\"cit\">; 270:158-162. DOI<\/span><span class=\"citation-doi\">: 10.3233\/SHTI200142.<\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\"><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\"><span class=\"inline-comment-marker active\" data-ref=\"787cb792-c265-4306-ba1a-a3bd5ef96a44\">Bild R, Bialke M, Buckow K, Ganslandt T, Ihrig K, Jahns R, Merzweiler A, Roschka S, Schreiweis B, St\u00e4ubert S, Zenker S, Prasser F.<br \/>\n<a class=\"external-link\" href=\"https:\/\/doi.org\/10.1186\/s12911-020-01138-6\" rel=\"nofollow\">Towards a comprehensive and interoperable representation of consent-based data usage permissions in the German medical informatics initiative<\/a><br \/>\nBMC Med Inform Decis Mak 2020; 20, 103.\u00a0 <span class=\"identifier doi\"><span class=\"id-label\">DOI: 10.1186\/s12911-020-01138-6.<\/span><\/span><\/span><\/span><\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\"><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\"><span class=\"inline-comment-marker active\" data-ref=\"787cb792-c265-4306-ba1a-a3bd5ef96a44\">Becker L, Ganslandt T, Prokosch HU, Newe A.<br \/>\n<a class=\"external-link\" href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/32442156\/\" rel=\"nofollow\">Applied practice and possible leverage points for information technology support for the screening for clinical trials: A qualitative study<\/a><br \/>\n<span class=\"period\">JMIR Med Inform 2020; 8:e15749.<\/span> <span class=\"identifier doi\"><span class=\"id-label\">DOI: <\/span> 10.2196\/15749.<\/span><\/span><\/span><\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\"><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\"><span class=\"inline-comment-marker active\" data-ref=\"787cb792-c265-4306-ba1a-a3bd5ef96a44\">Zierk<\/span> J, Krebs A, Rauh M, Metzler M, L\u00f6scher A, Strasser E, Krause SW.<br \/>\n<a class=\"external-link\" href=\"https:\/\/doi.org\/10.1111\/bjh.16430\" rel=\"nofollow\">Blood counts in adult and elderly individuals: defining the norms over eight decades of life<\/a><br \/>\nBr J Haematol 2020; 189:777-789. <span class=\"identifier doi\"><span class=\"id-label\">DOI: <\/span> 10.1111\/bjh.16430<\/span><\/span><\/span><\/span>.<\/p>\n<p><span class=\"content\"><span class=\"text surname\"><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\"><span class=\"inline-comment-marker active\" data-ref=\"787cb792-c265-4306-ba1a-a3bd5ef96a44\"><span class=\"inline-comment-marker\" data-ref=\"7b4b1696-982d-49b5-9eb8-30042438438b\">Zierk<\/span> J, Arzideh F, Kapsner LA, Prokosch HU, Metzler M, Rauh M.<br \/>\n<a class=\"external-link\" href=\"https:\/\/doi.org\/10.1038\/s41598-020-58749-2\" rel=\"nofollow\">Reference Interval Estimation from Mixed Distributions using Truncation Points and the Kolmogorov-Smirnov Distance (kosmic)<\/a><br \/>\nSci Rep 2020; 10, 1704. DOI: 10.1038\/s41598-020-58749-2.<\/span><\/span><\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\"><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\"><span class=\"inline-comment-marker active\" data-ref=\"787cb792-c265-4306-ba1a-a3bd5ef96a44\">Buechner P, Hinderer M, Unberath P, Metzger P, Boeker M, Acker T, Haller F, Mack E, Nowak D, Paret C, Schanze D, von Bubnoff N, Wagner S, Busch H, Boerries M, Christoph J.<br \/>\n<a href=\"https:\/\/www.mdpi.com\/2075-4418\/10\/2\/93\">Requirements Analysis and Specification for a Molecular Tumor Board Platform Based on cBioPortal<\/a><br \/>\nDiagnostics 2020; 10, 93. DOI:10.3390\/diagnostics10020093.<\/span><\/span><\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\"><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\"><span class=\"inline-comment-marker active\" data-ref=\"787cb792-c265-4306-ba1a-a3bd5ef96a44\">Zabka S, Schulz S, Brunner O, Boeker M.<br \/>\n<a class=\"external-link\" href=\"https:\/\/content.iospress.com\/articles\/applied-ontology\/ao190220\" rel=\"nofollow\">How versioning of terminology systems can be supported by ontological models \u2013 a case study on TNM tumor classification<\/a><br \/>\nApplied Ontology 2020; 15:41-60. DOI: 10.3233\/AO-190220.<\/span><\/span><\/span><\/span><\/p>\n<p>Scheible R, Kadioglu D, Ehl S, Blum M, Boeker M, Folz M, Grimbacher B, G\u00f6bel J, Klein C, Nieters A, Rusch S, Kindle G, Storf H.<br \/>\n<a class=\"external-link\" href=\"https:\/\/medinform.jmir.org\/2020\/10\/e17420\/\">Enabling External Inquiries to an Existing Patient Registry by Using the Open Source Registry System for Rare Diseases: Demonstration of the System Using the European Society for Immunodeficiencies Registry.<\/a><br \/>\nJMIR Med Inform 2020; 8:e17420. DOI: 10.2196\/17420.<\/p>\n<\/div>\n<\/div>\n<\/div>\n<p><\/p>\n<div class=\"accordion-group fau\">\n<h2 class=\"accordion-heading\"><button class=\"accordion-toggle\" data-toggle=\"collapse\"  href=\"#collapse_5\" aria-expanded=\"false\" aria-controls=\"collapse_5\" id=\"collapse_button_5\"> 2019 <\/button><\/h2>\n<div id=\"collapse_5\" class=\"accordion-body\" aria-labelledby=\"collapse_button_5\">\n<div class=\"accordion-inner clearfix\">\n<p><span class=\"content\"><span class=\"text surname\"><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\">Zabka S, Ammon D, Ganslandt T, Gewehr J, Haverkamp C , Kiefer S, Lautenbacher H, L\u00f6be M, Thun S, Boeker M.<br \/>\n<a href=\"http:\/\/ceur-ws.org\/Vol-2518\/paper-ODLS14.pdf\">Towards a Medication Core Data Set for the Medical Informatics Initiative (MII): Initial Mapping Experience between the German Procedure Classification (OPS) and the Identification of Medicinal Products (IDMP)<\/a><br \/>\nProceedings of the Joint Ontology Workshops 2019, Episode V: The Styrian Autumn of Ontology, Graz, Austria, September 23-25, 2019. Edited by Adrien Barton, Selja Sepp\u00e4l\u00e4, Daniele Porello, Vol-2518.<\/span><\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\"><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\">Lenz S, Hess M, Binder H.<br \/>\n<a class=\"external-link\" href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/578252v1\" rel=\"nofollow\">Unsupervised deep learning on biomedical data with BoltzmannMachines.jl<\/a><br \/>\nPreprint Server bioRxiv.<\/span><\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\"><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\">Hampf C, Bahls T, Hund H, Drepper J, Lablans M, Speer R.<br \/>\n<a href=\"https:\/\/www.miracum.org\/wp-content\/uploads\/2020\/01\/mdi_4_2019_Record-Linkage-Optionen-f\u00fcr-die-standort\u00fcbergreifende-Datenzusammenf\u00fchrung.pdf\">Record Linkage: Optionen f\u00fcr standort\u00fcbergreifende Datenzusammenf\u00fchrung<\/a><br \/>\n<span role=\"menubar\">mdi \u2013 Forum der Medizin_Dokumentation und Medizin_Informatik 4_2019<\/span>.<\/span><\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\"><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\">Mate S, B\u00fcrkle T, Kapsner LA, Toddenroth D, Kampf M, Sedlmayr M, Castellanos I, Prokosch HU, Kraus S.<br \/>\n<a class=\"external-link\" href=\"https:\/\/doi.org\/10.1016\/j.jbi.2019.103314\" rel=\"nofollow\">A Method for the Graphical Modeling of Relative Temporal Constraints<\/a><br \/>\n<span role=\"menubar\">J Biomed Inform<\/span> 2019, 100. DOI: 10.1016\/j.jbi.2019.103314.<\/span><\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\"><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\">Vey J, Kapsner LA, Fuchs M, Unberath P, Veronesi G, Kunz M.<br \/>\n<a href=\"https:\/\/www.mdpi.com\/2072-6694\/11\/10\/1606\">A Toolbox for Functional Analysis and the Systematic Identification of Diagnostic and Prognostic Gene Expression Signatures Combining Meta-Analysis and Machine Learning<\/a><br \/>\nCancers 2019, 11, 1606. DOI:10.3390\/cancers11101606.<\/span><\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\"><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\">Gruendner J<\/span><span class=\"inline-comment-marker valid active\" data-ref=\"48173943-bfe0-4ec4-b4ae-89e6b62fd96b\">, Schwachhofer T, Sippl P, Wolf N, Erpenbeck M, Gulden C, Kapsner LA, Zierk J, Mate S, St\u00fcrzl M, Croner R, Prokosch HU, Toddenroth D<\/span>.<br \/>\n<a href=\"https:\/\/journals.plos.org\/plosone\/article?id=10.1371\/journal.pone.0223010\">KETOS: Clinical decision support and machine learning as a service \u2013 A training and deployment platform based on Docker, OMOP-CDM, and FHIR Web Services<\/a><br \/>\n<\/span><\/span>PLoS ONE 2019; 14(10): e0223010. DOI: 10.1371\/journal.pone.0223010.<\/p>\n<p><span class=\"content\"><span class=\"text surname\">\u00d6felein M, Reichold M, Maier C, Prokosch HU.<br \/>\n<a href=\"http:\/\/ebooks.iospress.nl\/publication\/52740\">Designing a Framework of Components to Support Patient Engagement in Research<\/a><br \/>\nStud Health Technol Inform 2019; 267:20-27. DOI: 10.3233\/SHTI190800.<\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\">Vengadeswaran A, Neuhaus P, Hegselmann S, Storf H, Kadioglu D.<br \/>\n<a href=\"http:\/\/ebooks.iospress.nl\/publication\/52750\">Semantically annotated Metadata: Interconnecting Samply.MDR and MDM-Portal<\/a><br \/>\nStud Health Technol Inform 2019; 267:86-92. DOI: 10.3233\/SHTI190810.<\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\">Kapsner LA, Kampf MO, Seuchter SA, Kamdje-Wabo G, Gradinger T, Ganslandt T, Mate S, Guendner J, Kraska D, Prokosch HU.<br \/>\n<a href=\"http:\/\/ebooks.iospress.nl\/publication\/52774\">Moving Towards an EHR Data Quality Framework: The MIRACUM Approach<\/a><br \/>\nStud Health Technol Inform 2019; 267:247-253. DOI: 10.3233\/SHTI190834.<\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\">Schneiderheinze H, Prokosch HU, Apel H, Bellut L, Wullich B, Trollmann R, Sch\u00fcttler C.<br \/>\n<a href=\"http:\/\/ebooks.iospress.nl\/publication\/52781\">Development and usability analysis of a multimedia eConsent solution<\/a><br \/>\nStud Health Technol Inform 2019; 267:297-303. DOI: 10.3233\/SHTI190841.<\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\">Gulden C, Kirchner M, Sch\u00fcttler C, Hinderer M, Kampf M, Prokosch HUP, Toddenroth D.<br \/>\n<span class=\"title-text\"><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S138650561830933X\">Extractive summarization of clinical trial descriptions<\/a><\/span><br \/>\nInt J Med Inform 2019; 129:114-121. DOI: 10.1016\/j.ijmedinf.2019.05.019.<\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\">Bild R, Ganslandt T, Ihrig K, Jahns R, Merzweiler A, Schreiweis B\u00a0, St\u00e4ubert S, Zenker S, Bialke M, Prasser F.<br \/>\n<a class=\"\" href=\"https:\/\/confluence.imi.med.fau.de\/download\/attachments\/82480194\/MEDIZININFORMATIK-INITIATIVE_EHC_2_3_2019.pdf?version=1&amp;modificationDate=1562223864000&amp;api=v2\" data-linked-resource-id=\"109840711\" data-linked-resource-version=\"1\" data-linked-resource-type=\"attachment\" data-linked-resource-default-alias=\"MEDIZININFORMATIK-INITIATIVE_EHC_2_3_2019.pdf\" data-nice-type=\"PDF Document\" data-linked-resource-content-type=\"application\/pdf\" data-linked-resource-container-id=\"82480194\" data-linked-resource-container-version=\"26\">Erster Schritt: Im Rahmen der Medizininformatik-Initiative des Bundesforschungsministeriums ist eine elektronische Abbildung von Informationen aus Patienten-Einwilligungserkl\u00e4rungen entwickelt worden<\/a><br \/>\nE-HEALTH-COM 2019; 2_3:50-53.<\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\">Gruendner J, Prokosch HU, Schindler S, Lenz S, Binder H.<br \/>\n<a class=\"external-link\" href=\"http:\/\/ebooks.iospress.nl\/publication\/51364\" rel=\"nofollow\">A Queue-Poll Extension and DataSHIELD: Standardised, Monitored, Indirect and Secure Access to Sensitive Data<\/a><br \/>\nStud Health Technol Inform 2019; 258:115-119. DOI: 10.3233\/978-1-61499-959-1-115.<\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\">Gulden C, Landerer I, Nassirian A, Altun FB, Andrae J.<br \/>\n<a class=\"external-link\" href=\"http:\/\/ebooks.iospress.nl\/publication\/51389\" rel=\"nofollow\">Extraction and Prevalence of Structured Data Elements in Free-Text Clinical Trial Eligibility Criteria<\/a><br \/>\nStud Health Technol Inform 2019; 258:226-230. DOI: 10.3233\/978-1-61499-959-1-226.<\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\">Hasselblatt H, Andrae J, Tassoni A, Fitzer K, Bahls T, Prokosch HU, Boeker M.<br \/>\n<a class=\"external-link\" href=\"http:\/\/ebooks.iospress.nl\/publication\/51387\" rel=\"nofollow\">Establishing an Interoperable Clinical Trial Information System Within MIRACUM<\/a><br \/>\nStud Health Technol Inform 2019; 258:216-220. DOI: 10.3233\/978-1-61499-959-1-216.<\/span><\/span><\/p>\n<p>Walther D, Paret C, Ritzel C, B\u00fcchner P, Unberath P, Maier W, Metzger P, Christoph J, Storf H, Boerries M, Wagner S.<br \/>\n<a class=\"external-link\" href=\"https:\/\/www.egms.de\/static\/en\/meetings\/gmds2019\/19gmds179.shtml\" rel=\"nofollow\">Definition of an annotation pipeline for a molecular tumor board focused on the processing of the result and oncological drugs in terms of usability and approval status<\/a><br \/>\nGMS Publishing House; 2019. DocAbstr. 283. DOI: 10.3205\/19gmds179.<\/p>\n<p><span class=\"content\"><span class=\"text surname\">Kampf MO, Kraska D, Prokosch HU.<br \/>\n<a class=\"external-link\" href=\"http:\/\/ebooks.iospress.nl\/publication\/51355\" rel=\"nofollow\">An Analysis of Erlangen University Hospital\u2019s Billing Data on Utility-Based De-Identification<\/a><br \/>\nStud Health Technol Inform 2019;258:70-74. DOI: 10.3233\/978-1-61499-959-1-70.<\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\">Sommer M, Kirchner M, Gulden C, Egloffstein S, Lux MP, Beckmann MW, Mackensen A, Prokosch HU.<br \/>\n<a class=\"external-link\" href=\"http:\/\/ebooks.iospress.nl\/publication\/51376\" rel=\"nofollow\">Design and Implementation of a Single Source Multipurpose Hospital-Wide Clinical Trial Registry<\/a><br \/>\nStud Health Technol Inform 2019; 258:164-168. DOI: 10.3233\/978-1-61499-959-1-164.<\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\">Unberath P, Knell C, Prokosch HU, Christoph J.<br \/>\n<a class=\"external-link\" href=\"http:\/\/ebooks.iospress.nl\/publication\/51349\" rel=\"nofollow\">Developing New Analysis Functions for a Translational Research Platform: Extending the cBioPortal for Cancer Genomics<\/a><br \/>\nStud Health Technol Inform 2019; 258:46-50. DOI: 10.3233\/978-1-61499-959-1-46.<\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\"><span lang=\"EN-US\">Daumke P, Heitmann KU, Heckmann S, Mart\u00ednez-Costa C, Schulz S.<\/span><br \/>\n<span lang=\"EN-US\"><a href=\"http:\/\/ebooks.iospress.nl\/publication\/51953\">Clinical Text Mining on FHIR<\/a><\/span><br \/>\nStud Health Technol Inform 2019 ;264:83-87. DOI: 10.3233\/SHTI190188.<\/span><\/span><\/p>\n<p><span class=\"content\"><span class=\"text surname\">Ganslandt T, Neumaier M.<br \/>\n<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/30496134\/\">Digital networks for laboratory data: potentials, barriers and current initiatives<\/a><br \/>\nClin Chem Lab Med 2019 ;57:336-342. <span class=\"identifier doi\"><span class=\"identifier pubmed\"><span class=\"id-label\">DOI: 10.1515\/cclm-2018-1131.<\/span><\/span><\/span><\/span><\/span><\/p>\n<\/div>\n<\/div>\n<\/div>\n<p><\/p>\n<div class=\"accordion-group fau\">\n<h2 class=\"accordion-heading\"><button class=\"accordion-toggle\" data-toggle=\"collapse\"  href=\"#collapse_6\" aria-expanded=\"false\" aria-controls=\"collapse_6\" id=\"collapse_button_6\"> 2018 <\/button><\/h2>\n<div id=\"collapse_6\" class=\"accordion-body\" aria-labelledby=\"collapse_button_6\">\n<div class=\"accordion-inner clearfix\">\n<p>Schoenthaler M, Boeker M, Horki P.<br \/>\n<a class=\"external-link\" href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/30531434\" target=\"_blank\" rel=\"nofollow noopener noreferrer\">How to compete with Google and Co.: big data and artificial intelligence in stones<\/a><br \/>\nCurr Opin Urol 2018; 29:135-143 DOI: 10.1097\/MOU.0000000000000578.<\/p>\n<p>Bietenbeck A, Boeker M, Schulz S.<br \/>\n<a href=\"https:\/\/www.degruyter.com\/document\/doi\/10.1515\/labmed-2018-0103\/html\">NPU, LOINC, and SNOMED CT: a comparison of terminologies for laboratory results reveals individual advantages and a lack of possibilities to encode interpretive comments<\/a><br \/>\n<span class=\"inline-comment-marker\" data-ref=\"f2d47743-72e6-41b7-a4a0-21b7b0954afd\">Journal of Laboratory Medicine<\/span><span class=\"inline-comment-marker\" data-ref=\"f2d47743-72e6-41b7-a4a0-21b7b0954afd\"> 2018; 42: 267-275. DOI: 10.1515\/labmed-2018-0103.<\/span><\/p>\n<p>Lenz S, Z\u00f6ller D, Hess M, Binder H.<br \/>\n<a href=\"https:\/\/www.egms.de\/static\/en\/meetings\/gmds2018\/18gmds097.shtml\" target=\"_blank\" rel=\"noopener noreferrer\">Architectures for distributed privacy-preserving deep learning<\/a><br \/>\nDeutsche Gesellschaft f\u00fcr Medizinische Informatik, Biometrie und Epidemiologie. 63. Jahrestagung der GMDS, Osnabr\u00fcck, 02.-06.09.2018. D\u00fcsseldorf: German Medical Science GMS Publishing House; 2018. DocAbstr. 207. DOI: 10.3205\/18gmds097.<\/p>\n<p>Treppner M, Lenz S, Binder H, Z\u00f6ller D.<br \/>\n<a href=\"http:\/\/ebooks.iospress.nl\/publication\/50046\" target=\"_blank\" rel=\"noopener noreferrer\">Modeling Activity Tracker Data Using Deep Boltzmann Machines<\/a><br \/>\nStud Health Technol Inform 2018; 253:155-159. DOI: 10.3233\/978-1-61499-896-9-155.<\/p>\n<p>Kadioglu D, Breil B, Knell C, Lablans M, Mate S, Schlue D, Serve H, Storf H,\u00a0 \u00dcckert F,\u00a0 Wagner T, Weingardt P, Prokosch HU.<br \/>\n<a href=\"http:\/\/ebooks.iospress.nl\/publication\/50022\" target=\"_blank\" rel=\"noopener noreferrer\">Samply.MDR \u2013 A Metadata Repository and Its Application in Various Research Networks<\/a><br \/>\nStud Health Technol Inform 2018; 253:50-54. DOI: 10.3233\/978-1-61499-896-9-50.<\/p>\n<p>Gulden C, Mate S, Prokosch HU, Kraus S.<br \/>\n<a href=\"http:\/\/ebooks.iospress.nl\/publication\/50011\" target=\"_blank\" rel=\"noopener noreferrer\">Investigating the Capabilities of FHIR Search for Clinical Trial Phenotyping<\/a><br \/>\nStud Health Technol Inform 2018; 253:3-7. DOI: 10.3233\/978-1-61499-896-9-3. <label><\/label><\/p>\n<p>Prokosch HU, Acker T, Bernarding J, Binder H, Boeker M, Boerries M, Daumke P, Ganslandt T, Hesser J, H\u00f6ning G, Neumaier M, Marquardt K, Renz H, Rothk\u00f6tter HJ, Schade-Brittinger C, Schm\u00fccker P, Sch\u00fcttler J, Sedlmayr M, Serve H, Sohrabi K, Storf H.<br \/>\n<a href=\"https:\/\/www.thieme-connect.de\/products\/ejournals\/pdf\/10.3414\/ME17-02-0025.pdf\" target=\"_blank\" rel=\"noopener noreferrer\">MIRACUM: Medical Informatics in Research and Care in University Medicine \u2013\u00a0A Large Data Sharing Network to Enhance Translational Research and Medical Care<\/a><br \/>\nMethods Inf Med 2018; 57:e82\u2013 e91, DOI: 3414\/ME17\u201302\u20130025.<\/p>\n<p>Sedlmayr M, Prokosch HU.<br \/>\n<a href=\"https:\/\/www.miracum.org\/wp-content\/uploads\/2018\/06\/OMOP_MIRACUM_eHealth.com_Juli.2018.pdf\">Datenaustausch in der Forschung via OMOP\/OHDSI<\/a><br \/>\nEHEALTHCOM 4\/18, COMPLEX|Medizininformatik 34-37, Juni 2018.<\/p>\n<p>Knaup P, M. Deserno TM, Prokosch HU, Sax U.<br \/>\n<a href=\"https:\/\/www.thieme-connect.de\/products\/ejournals\/abstract\/10.1055\/s-0038-1641210\">Implementation of a National Framework to Promote Health Data Sharing<\/a><br \/>\nCC-BY-NC-ND 4.0 \u00b7 Yearb Med Inform, April 2018, DOI: 10.1055\/s-0038-1641210.<\/p>\n<p>Hinderer M, Boerries M, Boeker M, Neumaier M, Loubal FP, Acker T, Brunner M, Prokosch HU, Christoph J.<br \/>\n<a href=\"http:\/\/ebooks.iospress.nl\/publication\/48916\">Implementing Pharmacogenomic Clinical Decision Support into German Hospitals<\/a><br \/>\nStud Health Technol Inform 2018; 247:870-874. DOI: 10.3233\/978-1-61499-852-5-870.<\/p>\n<p>Maier C, Lang L, Storf H, Vormstein P, Bieber R, Bernarding J, Herrmann T, Haverkamp C, Horki P, Laufer J, Berger F, H\u00f6ning G, Fritsch HW, Sch\u00fcttler J, Ganslandt T, Prokosch HU, Sedlmayr M.<br \/>\n<a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/29365340\">Towards Implementation of OMOP in a German University Hospital Consortium<\/a><br \/>\n<span role=\"menubar\">Appl Clin Inform<\/span> 2018; 9:54-61. DOI: 10.1055\/s-0037-1617452 .<\/p>\n<p>Haverkamp C, Ganslandt T, Horki P, Boeker M, D\u00f6rfler A, Schwab S, Berkefeld J, Pfeilschifter W, Niesen WD, Egger K, Kaps M, Brockmann MA, Neumaier-Probst E, Szabo K, Skalej M, Bien S, Best C, Prokosch HU, Urbach H.<br \/>\n<a href=\"https:\/\/link.springer.com\/article\/10.1007%2Fs00062-017-0656-y\">Regional Differences in Thrombectomy Rates: Secondary use of Billing Codes in the MIRACUM (Medical Informatics for Research and Care in University Medicine) Consortium<\/a><br \/>\nClin Neuroradiol 2018; 28:225-234.8. DOI: 10.1007\/s00062-017-0656-y.<\/p>\n<\/div>\n<\/div>\n<\/div>\n<p><\/p>\n<div class=\"accordion-group fau\">\n<h2 class=\"accordion-heading\"><button class=\"accordion-toggle\" data-toggle=\"collapse\"  href=\"#collapse_7\" aria-expanded=\"false\" aria-controls=\"collapse_7\" id=\"collapse_button_7\"> 2017 <\/button><\/h2>\n<div id=\"collapse_7\" class=\"accordion-body\" aria-labelledby=\"collapse_button_7\">\n<div class=\"accordion-inner clearfix\">\n<p>Christoph J, Knell C, Bosserhoff A, Naschberger E, St\u00fcrzl M, R\u00fcbner M, Seuss H, Ruh M, Prokosch HU, Sedlmayr B.<br \/>\n<a href=\"https:\/\/www.thieme-connect.de\/products\/ejournals\/pdf\/10.4338\/ACI-2017-05-RA-0085.pdf\">Usability and Suitability of the Omics-Integrating Analysis Platform tranSMART for Translational Research and Education<\/a><br \/>\nACI 2017; 8:1173-1183. DOI: <span dir=\"ltr\" role=\"presentation\">10.4338\/ACI-2017-05-RA-0085.<\/span><\/p>\n<p>Hinderer M, Boeker M, Wagner SA, Lablans M, Newe S, H\u00fclsemann JL, Neumaier M, Binder H, Renz H, Acker T, Prokosch HU, Sedlmayr M.<br \/>\n<a href=\"https:\/\/bmcmedinformdecismak.biomedcentral.com\/articles\/10.1186\/s12911-017-0480-y\" target=\"_blank\" rel=\"noopener noreferrer\">Integrating clinical decision support systems for pharmacogenomic testing into clinical routine \u2013 a scoping review of designs of user-system interactions in recent system development<\/a><br \/>\nBMC Med Inform Decis Mak 2017; 17:81. DOI: 10.1186\/s12911-017-0480-y.<\/p>\n<p>Hinderer M, Boeker M, Wagner SA, Binder H, \u00dcckert F, H\u00fclsemann JL, Neumaier M, Schade-Brittinger C, Acker T, Prokosch HU, Sedlmayr B.<br \/>\n<a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/?term=The+experience+of+physicians+in+pharmacogenomic+clinical+decision+support+within+eight+German\">The experience of physicians in pharmacogenomic clinical decision support within eight German University Hospitals<\/a><br \/>\nPharmacogenomics 2017 18:773-785. DOI: 10.2217\/pgs-2017-0027.<\/p>\n<p>Hinderer M, Boerries M, Haller F, Wagner S, Sollfranke S, Acker T, Prokosch HU. Christoph J.<br \/>\n<a href=\"http:\/\/ebooks.iospress.nl\/publication\/46459\" target=\"_blank\" rel=\"noopener noreferrer\">Supporting Molecular Tumor Boards in Molecular-guided Decision-making \u2013 the Current Status of Five German University Hospitals<br \/>\n<\/a>Stud Health Technol Inform 2017; 236:48-54. DOI: 10.3233\/978-1-61499-759-7-48.<\/p>\n<p>Christoph J, Knell C, Naschberger E, St\u00fcrzl M, Maier C, Prokosch HU, Sedlmayr M.<br \/>\n<a href=\"http:\/\/ebooks.iospress.nl\/publication\/46462\" target=\"_blank\" rel=\"noopener noreferrer\">Two Years of tranSMART in a University Hospital for Translational Research and Education<\/a><br \/>\nStud Health Technol Inform. 2017 ;236:70-79. DOI: 10.3233\/978-1-61499-759-7-70.<\/p>\n<p>Knell C, Sedlmayr M, Christoph J.<br \/>\n<a href=\"http:\/\/ebooks.iospress.nl\/publication\/46501\" target=\"_blank\" rel=\"noopener noreferrer\">Developing Interactive Plug-ins for tranSMART Using the SmartR Framework: The Case of Survival Analysis<\/a><br \/>\nStud Health Technol Inform. 2017; 236:375-382. DOI: 10.3233\/978-1-61499-759-7-375.<\/p>\n<p>Prabhune, A, Stotzka, Gertz, M., Hesser, J.<br \/>\n<a href=\"https:\/\/www.scitepress.org\/Link.aspx?doi=10.5220\/0006109402360243\">Managing Provenance for Medical Datasets An Example Case for Documenting the Workflow for Image Processing<\/a><br \/>\nHEALTHINF 2017:236-243. <span id=\"ContentPlaceHolder1_LinkPaperPage_LinkPaperContent_HarvardCitations\">DOI: 10.5220\/0006109402360243.<\/span><\/p>\n<\/div>\n<\/div>\n<\/div>\n<p>\n<\/div>\n\n<\/div>\n<div class=\"shariff\"><ul class=\"shariff-buttons theme-default orientation-horizontal buttonsize-medium\"><li class=\"shariff-button mastodon shariff-nocustomcolor\" style=\"background-color:#563ACC\"><a href=\"https:\/\/s2f.kytta.dev\/?text=Publications https%3A%2F%2Fwww.miracum.org%2Fen%2Fweiterfuehrende-lektuere%2Fpublikationen%2F\" title=\"Share on Mastodon\" aria-label=\"Share on Mastodon\" role=\"button\" rel=\"noopener nofollow\" class=\"shariff-link\" style=\"; background-color:#6364FF; 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